学习笔记TF063:TensorFlow Debugger

Posted 2020-10-14 利炳根

TensorFlow Debugger(tfdbg)，TensorFlow专用调试器。用断点、计算机图形化展现实时数据流，可视化运行TensorFlow图形内部结构、状态。有助训练推理调试模型错误。https://www.tensorflow.org/programmers_guide/debugger 。

常见错误类型，非数字(nan)、无限值(inf)。tfdbg命令行界面(command line interface,CLI)。

Debugger示例。错误运行MNIST训练，通过TensorFlow Debugger找到出错地方，改正。https://github.com/tensorflow/tensorflow/blob/master/tensorflow/python/debug/examples/debug_mnist.py 。

先直接执行。

python -m tensorflow.python.debug.examples.debug_mnist

准确率第一次训练上千，后面保持较低水平。
TensorFlow Debugger，在每次调用run()前后基于终端用户界面(UI)，控制执行、检查图内部状态。

from tensorflow.python import debug as tf_debug
sess = tr.debug.LocalCLIDebugWrapperSession(sess)
sess.add_tensor_filter("has_inf_or_nan", tf_debug.has_inf_or_nan)

张量值注册过滤器has_inf_on_nan，判断图中间张量是否有nan、inf值。
开启调试模式(debug)。

python -m tensorflow.python.debug.examples.debug_mnist -debug
python debug_mnist.py --debug=True

运行开始UI(run-start UI)，在tfdbg>后输入交互式命令，run()进入运行结束后UI(run-end UI)。连续运行10次

tfdbg>run -t 10
找出图形第一个nan或inf值

tfdbg> run -f has_inf_or_nan

第一行灰底字表示tfdbg在调用run()后立即停止，生成指定过滤器has_inf_or_nan中间张量。第4次调用run()，36个中间张量包含inf或nan值。首次出现在cross_entropy/Log:0。单击图中cross_entropy/Log:0,单击下划线node_info菜单项，看节点输入张量，是否有0值。

tfdbg>pt softmax/Softmax:0

用ni命令-t标志追溯
ni -t cross_entropy/Log
问题代码

diff = -(y_ * tf.log(y))
修改，对tf.log输入值裁剪

diff = y_ * tf.log(tf.clip_by_value(y, 1e-8, 1.0))

from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import argparse
import sys
import tensorflow as tf
from tensorflow.examples.tutorials.mnist import input_data
from tensorflow.python import debug as tf_debug
IMAGE_SIZE = 28
HIDDEN_SIZE = 500
NUM_LABELS = 10
RAND_SEED = 42
def main(_):
# Import data
mnist = input_data.read_data_sets(FLAGS.data_dir,
one_hot=True,
fake_data=FLAGS.fake_data)
def feed_dict(train):
if train or FLAGS.fake_data:
xs, ys = mnist.train.next_batch(FLAGS.train_batch_size,
fake_data=FLAGS.fake_data)
else:
xs, ys = mnist.test.images, mnist.test.labels
return {x: xs, y_: ys}
sess = tf.InteractiveSession()
# Create the MNIST neural network graph.
# Input placeholders.
with tf.name_scope("input"):
x = tf.placeholder(
tf.float32, [None, IMAGE_SIZE * IMAGE_SIZE], name="x-input")
y_ = tf.placeholder(tf.float32, [None, NUM_LABELS], name="y-input")
def weight_variable(shape):
"""Create a weight variable with appropriate initialization."""
initial = tf.truncated_normal(shape, stddev=0.1, seed=RAND_SEED)
return tf.Variable(initial)
def bias_variable(shape):
"""Create a bias variable with appropriate initialization."""
initial = tf.constant(0.1, shape=shape)
return tf.Variable(initial)
def nn_layer(input_tensor, input_dim, output_dim, layer_name, act=tf.nn.relu):
"""Reusable code for making a simple neural net layer."""
# Adding a name scope ensures logical grouping of the layers in the graph.
with tf.name_scope(layer_name):
# This Variable will hold the state of the weights for the layer
with tf.name_scope("weights"):
weights = weight_variable([input_dim, output_dim])
with tf.name_scope("biases"):
biases = bias_variable([output_dim])
with tf.name_scope("Wx_plus_b"):
preactivate = tf.matmul(input_tensor, weights) + biases
activations = act(preactivate)
return activations
hidden = nn_layer(x, IMAGE_SIZE**2, HIDDEN_SIZE, "hidden")
logits = nn_layer(hidden, HIDDEN_SIZE, NUM_LABELS, "output", tf.identity)
y = tf.nn.softmax(logits)
with tf.name_scope("cross_entropy"):
# The following line is the culprit of the bad numerical values that appear
# during training of this graph. Log of zero gives inf, which is first seen
# in the intermediate tensor "cross_entropy/Log:0" during the 4th run()
# call. A multiplication of the inf values with zeros leads to nans,
# which is first in "cross_entropy/mul:0".
#
# You can use the built-in, numerically-stable implementation to fix this
# issue:
# diff = tf.nn.softmax_cross_entropy_with_logits(labels=y_, logits=logits)
diff = -(y_ * tf.log(y))
with tf.name_scope("total"):
cross_entropy = tf.reduce_mean(diff)
with tf.name_scope("train"):
train_step = tf.train.AdamOptimizer(FLAGS.learning_rate).minimize(
cross_entropy)
with tf.name_scope("accuracy"):
with tf.name_scope("correct_prediction"):
correct_prediction = tf.equal(tf.argmax(y, 1), tf.argmax(y_, 1))
with tf.name_scope("accuracy"):
accuracy = tf.reduce_mean(tf.cast(correct_prediction, tf.float32))
sess.run(tf.global_variables_initializer())
if FLAGS.debug:
sess = tf_debug.LocalCLIDebugWrapperSession(sess, ui_type=FLAGS.ui_type)
# Add this point, sess is a debug wrapper around the actual Session if
# FLAGS.debug is true. In that case, calling run() will launch the CLI.
for i in range(FLAGS.max_steps):
acc = sess.run(accuracy, feed_dict=feed_dict(False))
print("Accuracy at step %d: %s" % (i, acc))
sess.run(train_step, feed_dict=feed_dict(True))
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.register("type", "bool", lambda v: v.lower() == "true")
parser.add_argument(
"--max_steps",
type=int,
default=10,
help="Number of steps to run trainer.")
parser.add_argument(
"--train_batch_size",
type=int,
default=100,
help="Batch size used during training.")
parser.add_argument(
"--learning_rate",
type=float,
default=0.025,
help="Initial learning rate.")
parser.add_argument(
"--data_dir",
type=str,
default="/tmp/mnist_data",
help="Directory for storing data")
parser.add_argument(
"--ui_type",
type=str,
default="curses",
help="Command-line user interface type (curses | readline)")
parser.add_argument(
"--fake_data",
type="bool",
nargs="?",
const=True,
default=False,
help="Use fake MNIST data for unit testing")
parser.add_argument(
"--debug",
type="bool",
nargs="?",
const=True,
default=False,
help="Use debugger to track down bad values during training")
FLAGS, unparsed = parser.parse_known_args()
tf.app.run(main=main, argv=[sys.argv[0]] + unparsed)
远程调试。tfdbg offline_analyzer。设置本地、远程机器能访问共享目录。debug_utils.watch_graph函数设置运行时参数选项。运行session.run()，中间张量、运行时图像转储到共享目录。本地终端用tfdbg offline_analyzer加载、检查共享目录数据。

python -m tensorflow.python.debug.cli.offline_analyzer --dump_dir=/home/somebody/tfdbg_dumps_1
源码

from tensorflow.python.debug.lib import debug_utils
# 构建图，生成session对象，省略
run_options = tf.RunOptions()
debug_utils.watch_graph(
run_options,
sess.graph,
# 共享目录位置
# 多个客户端执行run，应用多个不同共享目录
debug_urls=["file://home/somebody/tfdbg_dumps_1"])
session.run(fetches, feed_dict=feeds, options=run_options)
或用会话包装器函数DumpingDebugWrapperSession在共享目录产生训练累积文件。

from tensorflow.python.debug.lib import debug_utils
sess = tf_debug.DumpingDebugWrapperSession(sess, "/home/somebody/tfdbg_dumps_1", watch_fn=my_watch_fn)

参考资料：
《TensorFlow技术解析与实战》

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