ImageJ软件

Posted 2022-11-06 SpikeKing

网站：ImageJ，Fiji是ImageJ的功能齐全版本，直接使用 Fiji(Fiji Is Just ImageJ) 即可。

• ImageJ is open source software for processing and analyzing scientific images.
• ImageJ是用于处理和分析科学图像的开源软件。

ImageJ is a Java-based image processing program developed at the National Institutes of Health and the Laboratory for Optical and Computational Instrumentation (LOCI, University of Wisconsin).

ImageJ是一个基于Java的图像处理程序，由 美国国家卫生研究院(National Institutes of Health) 和 光学和计算仪器实验室 (Laboratory for Optical and Computational Instrumentation，LOCI，University of Wisconsin) 开发。

Its first version, ImageJ 1.x, is developed in the public domain, while ImageJ2 and the related projects SciJava, ImgLib2, and SCIFIO are licensed with a permissive BSD-2 license.

ImageJ的第一个版本(ImageJ 1.x)是在公共域开发的，而 ImageJ2 和相关项目SciJava、ImgLib2和SCIFIO，使用 BSD-2 许可证被许可。

ImageJ was designed with an open architecture that provides extensibility via Java plugins and recordable macros.

ImageJ使用开放式架构设计，提供通过 Java插件的可扩展性，和可录制的宏。

Custom acquisition, analysis and processing plugins can be developed using ImageJ’s built-in editor and a Java compiler.

自定义采集、分析和处理插件，可以使用 ImageJ的内置编辑器 和 Java 编译器 开发。

User-written plugins make it possible to solve many image processing and analysis problems, from three-dimensional live-cell imaging to radiological image processing, multiple imaging system data comparisons to automated hematology systems.

用户编写的插件，可以解决许多图像处理和分析的问题，从三维活细胞(live-cell)成像，到放射图像处理，从多个成像系统数据比较，到自动化血液学系统。

ImageJ’s plugin architecture and built-in development environment has made it a popular platform for teaching image processing.

ImageJ的插件架构和内置开发环境，使其成为讲解图像处理的流行平台。

ImageJ can be run as an online applet, a downloadable application, or on any computer with a Java 5 or later virtual machine.

ImageJ可以作为在线程序、可下载的应用程序、或在任何具有Java5或更高版本虚拟机的计算机上运行。

Downloadable distributions are available for Microsoft Windows, the classic Mac OS, macOS, Linux, and the Sharp Zaurus PDA.

下载的发行版，可运行于Microsoft Windows、经典的Mac OS、macOS、Linux和Sharp Zaurus PDA。

The source code for ImageJ is freely available from the NIH.

ImageJ的源代码可从NIH免费获得。

The project developer, Wayne Rasband, retired from the Research Services Branch of the NIH’s National Institute of Mental Health in 2010, but continues to develop the software.

项目开发者，韦恩·拉斯班德(Wayne Rasband)，于2010年从NIH国家心理健康研究所(NIH’s National Institute of Mental Health)的研究服务部门退休，但是仍在继续开发该软件。

Features

ImageJ can display, edit, analyze, process, save, and print 8-bit color and grayscale, 16-bit integer, and 32-bit floating point images.

ImageJ可以显示、编辑、分析、处理、保存，和打印8位彩色和灰度图像、16位整数和32位浮点图像。

It can read many image file formats, including TIFF, PNG, GIF, JPEG, BMP, DICOM, and FITS, as well as raw formats.

ImageJ可以读取多种图像文件格式，包括TIFF、PNG、GIF、JPEG、BMP、DICOM和FITS，以及原始格式。

ImageJ supports image stacks, a series of images that share a single window, and it is multithreaded, so time-consuming operations can be performed in parallel on multi-CPU hardware.

ImageJ支持图像堆栈，共享单个窗口的一系列图像，ImageJ是多线程的，因此，耗时的操作，可以在多CPU硬件上，并行执行。

ImageJ can calculate area and pixel value statistics of user-defined selections and intensity-thresholded objects.

ImageJ可以计算面积和像素值统计，来源于用户定义选择，和强度阈值(intensity-thresholded)对象。

It can measure distances and angles. It can create density histograms and line profile plots.

ImageJ可以测量距离和角度，可以创建密度直方图和线剖面图。

It supports standard image processing functions such as logical and arithmetical operations between images, contrast manipulation, convolution, Fourier analysis, sharpening, smoothing, edge detection, and median filtering.

ImageJ支持标准的图像处理功能，例如图像之间的逻辑和算术运算(logical and arithmetical operations)、对比度处理(contrast manipulation)、卷积(convolution)、傅里叶分析(Fourier analysis)、锐化(sharpening)、平滑(smoothing)、边缘检测(edge detection)和中值滤波(median filtering)。

It does geometric transformations such as scaling, rotation, and flips.

ImageJ进行几何变换(geometric transformations)，例如缩放(scaling)、旋转(rotation)和翻转(flips)。

The program supports any number of images simultaneously, limited only by available memory.

该程序同时支持任意数量的图像，仅受可用内存限制。

ImageJ的介绍：https://imagej.net/software/imagej2/

• ImageJ is public domain software for processing and analyzing scientific images.

  • ImageJ是用于处理和分析科学图像的公共领域软件。

• ImageJ2 is a new version of ImageJ for multidimensional image data, with a focus on scientific imaging. It includes some additional features not available in the original ImageJ.

  • ImageJ2是用于多维图像数据的ImageJ的新版本，专注于科学成像，包括一些原始ImageJ中没有的附加功能。

• Fiji Is Just ImageJ—a “batteries-included” distribution of ImageJ and ImageJ2 which includes many useful plugins contributed by the community.

  • Fiji is Just ImageJ，ImageJ和ImageJ2的“功能齐全(batteries-included)”发行版，其中包括社区贡献的许多有用插件。
  • 直接使用Fiji软件，即可。

ImageJ的GitHub：https://github.com/imagej

ImageJ(Fiji)的Tutorials：https://github.com/imagej/tutorials/tree/master/notebooks