记一次虚机强制断电磁盘损坏导致 K8s 集群部分节点未就绪(NotReady) 问题解决

Posted 2023-02-07

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写在前面

自己的实验环境遇到，分享解决过程
理解不足小伙伴帮忙指正

我所渴求的，無非是將心中脫穎語出的本性付諸生活，為何竟如此艱難呢 ------赫尔曼·黑塞《德米安》

我遇到了什么问题

哈，中午走的时候钥匙被锁屋里了，急着回家找师傅开门，单位的 nuc 要带回去，就把自己 nuc 强制关机了，结果虚机部署的 k8s 集群回来都起不来了，不过还不算太糟糕，至少 master 还在，不幸的万幸。之前有一次是强制关机了，结果也是 k8s 集群都起不来了，etcd 对应的 pod 也挂掉了，没有备份，最后没办法，使用 kubeadm 重置集群了。

┌──[root@vms81.liruilongs.github.io]-[~]
└─$kubectl get nodes
NAME                          STATUS     ROLES                  AGE    VERSION
vms155.liruilongs.github.io   NotReady   <none>                 76d    v1.22.2
vms156.liruilongs.github.io   NotReady   <none>                 76d    v1.22.2
vms81.liruilongs.github.io    Ready      control-plane,master   400d   v1.22.2
vms82.liruilongs.github.io    NotReady   <none>                 400d   v1.22.2
vms83.liruilongs.github.io    Ready      <none>                 400d   v1.22.2
┌──[root@vms81.liruilongs.github.io]-[~]
└─$

哈，部分集群节点未就绪，对应的虚机也起不来，下面为开机启动直接进入救援模式的提示信息。

[ 9.800336] XFS (sdal): Metadata corruption detected at xfs_agf_read_verify+0
×78/8×12[ xfs], xfs_agf block 0x4b000019.008356] XFS(sda1): Unmount and run xfs_repair
9.008376] XFS(sdal): First 64 butes of corrupted metadata buffer:
9.808395] ffff88803610a400:58 41 47 46 80 0880 01 80 08 80 81 80 96 88 88
XAGF...….
I9.8884151ffff88803610a410:80 88 80 81 80 88 88 82 80 88 80 88 80 88 80 819.808435] ffff88803610a420:80 88 80 81 80 88 80 88 80 88 88 88 80 8880 83
I 9.080454] ffff88003610a430:00 80 00 84 00 8d d1 2d 00 77 c3 a3 00 80 08 88
....-.w.……
I9.080515] XFS(sdal): metadata I/0 error: block 0x4b00001 ("xfs_trans_read_
buf_map") error 117 numblks 1
Generating "/run/initramfs/rdsosreport. txt."
Entering emergency mode. Exit the shell to continue.
Type "journalctl"to view system logs.
You might want to save "/run/initramfs/rdsosreport. txt"to a USB stick or /boot after mounting them and attach it to a bug report.
:/#

磁盘损坏，需要修复。哈，太坑了

我是如何做的

寻找磁盘恢复的解决方案，操作步骤：

启动虚拟机 E 进入单用户模式
在 linux16 开头的那行末尾添加 rd.break
在上一步的基础上 ctrl+x 进入救援模式,然后执行 xfs_repair -L /dev/sda1 : 这里的 sda1 是上面损坏的磁盘，可以在救援模式的输出中看到。
执行 reboot

OK，陆续修复磁盘，开机，然后查看节点，发现恢复了一个，还是有两个节点未就绪。

┌──[root@vms81.liruilongs.github.io]-[~]
└─$kubectl get nodes
NAME                          STATUS     ROLES                  AGE    VERSION
vms155.liruilongs.github.io   NotReady   <none>                 76d    v1.22.2
vms156.liruilongs.github.io   Ready      <none>                 76d    v1.22.2
vms81.liruilongs.github.io    Ready      control-plane,master   400d   v1.22.2
vms82.liruilongs.github.io    NotReady   <none>                 400d   v1.22.2
vms83.liruilongs.github.io    Ready      <none>                 400d   v1.22.2
┌──[root@vms81.liruilongs.github.io]-[~]
└─$

我最开始以为 kubectl 的问题,排查了日志发现没有问题。

┌──[root@vms82.liruilongs.github.io]-[~]
└─$systemctl status kubelet.service
● kubelet.service - kubelet: The Kubernetes Node Agent
   Loaded: loaded (/usr/lib/systemd/system/kubelet.service; enabled; vendor preset: disabled)
  Drop-In: /usr/lib/systemd/system/kubelet.service.d
           └─10-kubeadm.conf
   Active: active (running) since 二 2023-01-17 20:53:02 CST; 1min 18s ago
   ....

然后在集群事件中，发现 Is the docker daemon running?, Error while dialing dial unix /run/containerd/containerd. sock: connect: connection refused": unavailable 类似的事件提示。

┌──[root@vms81.liruilongs.github.io]-[~]
└─$kubectl get events | grep -i error
54m         Warning   Unhealthy                pod/calico-node-nfkzd                                 Readiness probe failed: calico/node is not ready: BIRD is not ready: Error querying BIRD: unable to connect to BIRDv4 socket: dial unix /var/run/bird/bird.ctl: connect: no such file or directory
54m         Warning   Unhealthy                pod/calico-node-nfkzd                                 Readiness probe failed: calico/node is not ready: BIRD is not ready: Error querying BIRD: unable to connect to BIRDv4 socket: dial unix /var/run/calico/bird.ctl: connect: connection refused
44m         Warning   FailedCreatePodSandBox   pod/calico-node-vxpxt                                 Failed to create pod sandbox: rpc error: code = Unknown desc = failed to start sandbox container for pod "calico-node-vxpxt": Error response from daemon: connection error: desc = "transport: Error while dialing dial unix /run/containerd/containerd.sock: connect: connection refused": unavailable
44m         Warning   FailedCreatePodSandBox   pod/calico-node-vxpxt                                 Failed to create pod sandbox: rpc error: code = Unknown desc = failed to start sandbox container for pod "calico-node-vxpxt": Error response from daemon: transport is closing: unavailable
44m         Warning   FailedCreatePodSandBox   pod/kube-proxy-htg7t                                  Failed to create pod sandbox: rpc error: code = Unknown desc = failed to start sandbox container for pod "kube-proxy-htg7t": Error response from daemon: connection error: desc = "transport: Error while dialing dial unix /run/containerd/containerd.sock: connect: connection refused": unavailable
44m         Warning   FailedCreatePodSandBox   pod/kube-proxy-htg7t                                  Failed to create pod sandbox: rpc error: code = Unknown desc = failed to start sandbox container for pod "kube-proxy-htg7t": Error response from daemon: transport is closing: unavailable
44m         Warning   FailedCreatePodSandBox   pod/kube-proxy-htg7t                                  Failed to create pod sandbox: rpc error: code = Unknown desc = failed to create a sandbox for pod "kube-proxy-htg7t": error during connect: Post "http://%2Fvar%2Frun%2Fdocker.sock/v1.41/containers/create?name=k8s_POD_kube-proxy-htg7t_kube-system_85fe510d-d713-4fe6-b852-dd1655d37fff_15": EOF
44m         Warning   FailedKillPod            pod/skooner-5b65f884f8-9cs4k                          error killing pod: failed to "KillPodSandbox" for "eb888be0-5f30-4620-a4a2-111f14bb092d" with KillPodSandbo
Error: "rpc error: code = Unknown desc = [networkPlugin cni failed to teardown pod \\"skooner-5b65f884f8-9cs4k_kube-system\\" network: error getting ClusterInformation: Get \\"https://[10.96.0.1]:443/apis/crd.projectcalico.org/v1/clusterinformations/default\\": dial tcp 10.96.0.1:443: connect: connection refused, Cannot connect to the Docker daemon at unix:///var/run/docker.sock. Is the docker daemon running?]"
┌──[root@vms81.liruilongs.github.io]-[~]
└─$

有可以能有些节点的 docker 没有起来,然后我查看了未就绪节点的 docker 的状态

┌──[root@vms82.liruilongs.github.io]-[~]
└─$systemctl  status docker
● docker.service - Docker Application Container Engine
   Loaded: loaded (/usr/lib/systemd/system/docker.service; enabled; vendor preset: disabled)
   Active: inactive (dead)
     Docs: https://docs.docker.com

1月 17 21:08:19 vms82.liruilongs.github.io systemd[1]: Dependency failed for Docker Application Container Engine.
1月 17 21:08:19 vms82.liruilongs.github.io systemd[1]: Job docker.service/start failed with result dependency.
1月 17 21:08:25 vms82.liruilongs.github.io systemd[1]: Dependency failed for Docker Application Container Engine.
1月 17 21:08:25 vms82.liruilongs.github.io systemd[1]: Job docker.service/start failed with result dependency.
1月 17 21:08:30 vms82.liruilongs.github.io systemd[1]: Dependency failed for Docker Application Container Engine.
。。。。。。。

发现 docker 果然没有启动成功，提示他的依赖没有启动成功，查看一下 docker 的正向依赖，即在 docker 之前启动的服务

┌──[root@vms82.liruilongs.github.io]-[~]
└─$systemctl list-dependencies docker.service
docker.service
● ├─containerd.service
● ├─docker.socket
● ├─system.slice
● ├─basic.target
● │ ├─microcode.service
● │ ├─rhel-autorelabel-mark.service
● │ ├─rhel-autorelabel.service
● │ ├─rhel-configure.service
● │ ├─rhel-dmesg.service
● │ ├─rhel-loadmodules.service
● │ ├─selinux-policy-migrate-local-changes@targeted.service
● │ ├─paths.target
● │ ├─slices.target
● │ │ ├─-.slice
● │ │ └─system.slice
● │ ├─sockets.target
............................

然后我们看一下第一个依赖的服务 containerd.service ,查看发现也么有启动成功

┌──[root@vms82.liruilongs.github.io]-[~]
└─$systemctl status containerd.service
● containerd.service - containerd container runtime
   Loaded: loaded (/usr/lib/systemd/system/containerd.service; disabled; vendor preset: disabled)
   Active: activating (auto-restart) (Result: exit-code) since 二 2023-01-17 21:14:58 CST; 4s ago
     Docs: https://containerd.io
  Process: 6494 ExecStart=/usr/bin/containerd (code=exited, status=2)
  Process: 6491 ExecStartPre=/sbin/modprobe overlay (code=exited, status=0/SUCCESS)
 Main PID: 6494 (code=exited, status=2)

1月 17 21:14:58 vms82.liruilongs.github.io systemd[1]: Failed to start containerd container runtime.
1月 17 21:14:58 vms82.liruilongs.github.io systemd[1]: Unit containerd.service entered failed state.
1月 17 21:14:58 vms82.liruilongs.github.io systemd[1]: containerd.service failed.
┌──[root@vms82.liruilongs.github.io]-[~]
└─$

没有更多的提示信息，只是提示启动失败了，这里我们尝试重启试试

┌──[root@vms82.liruilongs.github.io]-[~]
└─$systemctl restart containerd.service
Job for containerd.service failed because the control process exited with error code. See "systemctl status containerd.service" and "journalctl -xe" for details.

查看 containerd 服务日志，这里先查看一下 error 的信息

┌──[root@vms82.liruilongs.github.io]-[~]
└─$journalctl -u  containerd | grep -i error -m 3
1月 17 20:41:56 vms82.liruilongs.github.io containerd[962]: time="2023-01-17T20:41:56.203387028+08:00" level=info msg="skip loading plugin \\"io.containerd.snapshotter.v1.aufs\\"..." error="aufs is not supported (modprobe aufs failed: exit status 1 \\"modprobe: FATAL: Module aufs not found.\\\\n\\"): skip plugin" type=io.containerd.snapshotter.v1
1月 17 20:41:56 vms82.liruilongs.github.io containerd[962]: time="2023-01-17T20:41:56.203699262+08:00" level=warning msg="failed to load plugin io.containerd.snapshotter.v1.devmapper" error="devmapper not configured"
1月 17 20:41:56 vms82.liruilongs.github.io containerd[962]: time="2023-01-17T20:41:56.204050775+08:00" level=info msg="skip loading plugin \\"io.containerd.snapshotter.v1.zfs\\"..." error="path /var/lib/containerd/io.containerd.snapshotter.v1.zfs must be a zfs filesystem to be used with the zfs snapshotter: skip plugin" type=io.containerd.snapshotter.v1
┌──[root@vms82.liruilongs.github.io]-[~]
└─$

我们通过日志，得到了下面的日志信息,猜测可能是磁盘损坏照成的，这里我们备份 /var/lib/containerd/ 对应的文件夹，删除试试

aufs is not supported (modprobe aufs failed: exit status 1 \\"modprobe: FATAL: Module aufs not found.
path /var/lib/containerd/io.containerd.snapshotter.v1.zfs must be a zfs filesystem to be used with the zfs snapshotter: sk

删除文件夹下所有文件

┌──[root@vms82.liruilongs.github.io]-[~]
└─$cd /var/lib/containerd/
io.containerd.content.v1.content/       io.containerd.runtime.v1.linux/         io.containerd.snapshotter.v1.native/    tmpmounts/
io.containerd.metadata.v1.bolt/         io.containerd.runtime.v2.task/          io.containerd.snapshotter.v1.overlayfs/
┌──[root@vms82.liruilongs.github.io]-[~]
└─$cd /var/lib/containerd/
┌──[root@vms82.liruilongs.github.io]-[/var/lib/containerd]
└─$rm -rf *
┌──[root@vms82.liruilongs.github.io]-[/var/lib/containerd]
└─$ls

删除之后尝试重新启动 containerd

┌──[root@vms82.liruilongs.github.io]-[/var/lib/containerd]
└─$systemctl start containerd
┌──[root@vms82.liruilongs.github.io]-[/var/lib/containerd]
└─$systemctl status containerd
● containerd.service - containerd container runtime
   Loaded: loaded (/usr/lib/systemd/system/containerd.service; disabled; vendor preset: disabled)
   Active: active (running) since 二 2023-01-17 21:25:13 CST; 51s ago
     Docs: https://containerd.io
  Process: 8180 ExecStartPre=/sbin/modprobe overlay (code=exited, status=0/SUCCESS)
 Main PID: 8182 (containerd)
   Memory: 146.8M
   ...........

OK ,启动成功，这个时候我们发现节点也正常了。

┌──[root@vms81.liruilongs.github.io]-[~]
└─$kubectl get nodes
NAME                          STATUS     ROLES                  AGE    VERSION
vms155.liruilongs.github.io   NotReady   <none>                 76d    v1.22.2
vms156.liruilongs.github.io   Ready      <none>                 76d    v1.22.2
vms81.liruilongs.github.io    Ready      control-plane,master   400d   v1.22.2
vms82.liruilongs.github.io    Ready      <none>                 400d   v1.22.2
vms83.liruilongs.github.io    Ready      <none>                 400d   v1.22.2
┌──[root@vms81.liruilongs.github.io]-[~]
└─$

其他的节点陆续操作下

在 192.168.26.155 发现这个节点 docker 也是启动失败的，但是问题不一样，操作后，服务没有自动重启，日志有error 级别的日志，

┌──[root@vms81.liruilongs.github.io]-[~]
└─$ssh root@192.168.26.155
Last login: Mon Jan 16 02:26:43 2023 from 192.168.26.81
┌──[root@vms155.liruilongs.github.io]-[~]
└─$systemctl is-active  docker
failed
┌──[root@vms155.liruilongs.github.io]-[~]
└─$cd /var/lib/containerd/
┌──[root@vms155.liruilongs.github.io]-[/var/lib/containerd]
└─$rm -rf *
┌──[root@vms155.liruilongs.github.io]-[/var/lib/containerd]
└─$systemctl start containerd
┌──[root@vms155.liruilongs.github.io]-[/var/lib/containerd]
└─$systemctl is-active  docker
failed
┌──[root@vms155.liruilongs.github.io]-[/var/lib/containerd]
└─$systemctl status docker
● docker.service - Docker Application Container Engine
   Loaded: loaded (/usr/lib/systemd/system/docker.service; enabled; vendor preset: disabled)
   Active: failed (Result: start-limit) since 二 2023-01-17 20:20:03 CST; 1h 31min ago
     Docs: https://docs.docker.com
  Process: 2030 ExecStart=/usr/bin/dockerd -H fd:// --containerd=/run/containerd/containerd.sock (code=exited, status=0/SUCCESS)
 Main PID: 2030 (code=exited, status=0/SUCCESS)

1月 17 20:20:02 vms155.liruilongs.github.io dockerd[2030]: time="2023-01-17T20:20:02.796621853+08:00" level=error msg="712fd90a1962d0f546eaf6c9db05c2577ac9855b38f9f41e37724402f10d3045 cleanup: failed to de...
1月 17 20:20:02 vms155.liruilongs.github.io dockerd[2030]: time="2023-01-17T20:20:02.796669296+08:00" level=error msg="Handler for POST /v1.41/containers/712fd90a1962d0f546eaf6c9db05c2577ac9855b38f9f41e377...
1月 17 20:20:03 vms155.liruilongs.github.io dockerd[2030]: time="2023-01-17T20:20:03.285529266+08:00" level=warning msg="grpc: addrConn.createTransport failed to connect to unix:///run/containerd/containe...
1月 17 20:20:03 vms155.liruilongs.github.io dockerd[2030]: time="2023-01-17T20:20:03.783878143+08:00" level=info msg="Processing signal terminated"
1月 17 20:20:03 vms155.liruilongs.github.io systemd[1]: Stopping Docker Application Container Engine...
1月 17 20:20:03 vms155.liruilongs.github.io dockerd[2030]: time="2023-01-17T20:20:03.784550238+08:00" level=info msg="Daemon shutdown complete"
1月 17 20:20:03 vms155.liruilongs.github.io systemd[1]: start request repeated too quickly for docker.service
1月 17 20:20:03 vms155.liruilongs.github.io systemd[1]: Failed to start Docker Application Container Engine.
1月 17 20:20:03 vms155.liruilongs.github.io systemd[1]: Unit docker.service entered failed state.
1月 17 20:20:03 vms155.liruilongs.github.io systemd[1]: docker.service failed.
Hint: Some lines were ellipsized, use -l to show in full.

服务没有自动重启，这里手动重启试试

┌──[root@vms155.liruilongs.github.io]-[/var/lib/containerd]
└─$systemctl restart docker

查看节点状态，所有节点 ready。

┌──[root@vms81.liruilongs.github.io]-[~]
└─$kubectl get nodes
NAME                          STATUS   ROLES                  AGE    VERSION
vms155.liruilongs.github.io   Ready    <none>                 76d    v1.22.2
vms156.liruilongs.github.io   Ready    <none>                 76d    v1.22.2
vms81.liruilongs.github.io    Ready    control-plane,master   400d   v1.22.2
vms82.liruilongs.github.io    Ready    <none>                 400d   v1.22.2
vms83.liruilongs.github.io    Ready    <none>                 400d   v1.22.2
┌──[root@vms81.liruilongs.github.io]-[~]
└─$

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写在前面

我遇到了什么问题

我是如何做的

记一次虚机强制断电磁盘损坏导致 K8s 集群部分节点未就绪(NotReady) 问题解决